Search results

Filters

  • Journals
  • Date

Search results

Number of results: 5
items per page: 25 50 75
Sort by:

Abstract

The systematic position of Sorbus population occurring in the Pieniny Mts. is controversial. To verify its taxonomic status we studied the ITS sequence of closely related species of the S. aria group: Sorbus sp. from the Pieniny Mts., S. aria from the Tatra Mts., S. graeca from the Balkans, and other well-distinguished native Polish Sorbus species (S. aria, S. aucuparia, S. intermedia and S. torminalis). As a reference we examined Sorbus populations closest to the Pieniny Mts. where S. graeca was reported to occur, in Slovakia. The results indicate that the Sorbus plants found in the Pieniny Mts. differ genetically from those in the Tatra Mts. but are identical to those collected from the Vihorlat Mts. in Slovakia and are closely related to S. graeca from the Balkans
Go to article

Abstract

Usnea aurantiaco-atra is the dominant flora around King George Island, Antarctica, whose specimens exhibited various phenotypes, even for those with the same ITS sequences in both mycobiont and photobiont. A comprehensive analysis of morphological traits of U. aurantiaco-atra including the reproductive structures, growth forms and ornamentation, cross section of the branches, and the substratum was carried out. Four arbitrary groups were identified based on their reproductive characters, but these groups cannot be distinguished from molecular phylogenetic trees based on fungal or algal ITS sequences. Further, the complicated morphological diversity of the thalli with the same ITS haplotypes in both mycobiont and photobiont suggest that some other factors in addition to the symbionts could influence the morphology of lichens. This implies that lichen is indeed a complex-mini-ecosystem rather than a dual symbiotic association of fungus and alga. Also, a lichenous fungi Phacopsis sp. was identified based on its anatomical characters and ITS sequence, which was also responsible for the black burls-like structures on U. aurantiaco-atra.
Go to article

Abstract

Cucumber mosaic virus (CMV; family Bromoviridae, genus Cucumovirus) is the most cosmopolitan plant virus occurring worldwide. In the present study, leaf samples showing deformations, mosaics, and chlorotic spots symptoms were collected from naturally infected Basella alba, Telfairia occidentalis and Talinum fruticosum in a home yard garden in Ibadan, Nigeria. Total nucleic acid was extracted from leaves and used as template for cDNA synthesis. RT-PCR was carried out using CMV-specific primers targeting RNA-1 segment. Samples were also tested by RT-PCR using Potyvirus and Begomovirus genusspecific primers. DNA fragments with the expected sizes of ~500 bp were amplified by using CMV-specific primers; however, the expected amplicons were not produced using specific primers used for the detection of potyviruses and begomoviruses. The nucleotide and deduced amino acid sequences obtained for the isolates studied contained 503–511 nt and 144 aa, respectively. The isolates shared 81.9–85.3% nucleotide and 74.3–77.8% amino acid sequence identities with each other. The results of BLASTN analyses showed the highest identities of the isolates (80–93%) with CMV strains from Japan, USA and South Korea. Alignment of deduced partial protein revealed multiple amino acid substitutions within the three isolates and high identities with CMV subgroup I. Phylogenetic analyses putatively categorized the isolates in close association with subgroup IB isolates. The three isolates clustered together into a separate subclade, indicating possible new CMV strains. The results provide the first molecular evidence for CMV infections of T. fruticosum and B. alba in Nigeria and seem to show the possible presence of new strain(s). These findings also add three new hosts to the list of natural host range of the virus in Nigeria.
Go to article

Abstract

This paper is both a review and a study. It discusses the taxonomic status of Yellow Archangel (Galeobdolon luteum Huds.) from historical and contemporary perspectives, and gives a comprehensive list of synonyms for the discussed genera, species and lower taxonomic units, including their publication details. In the study it is postulated that G. luteum should be included in the genus Lamium. The hypothesis is verified by a comparative analysis between the representatives of the genera Galeobdolon and Lamium in four DNA regions: ITS, accD, rpoC1 and trnH-psbA. The analysis supported the determination of phylogenetic relationships among the studied taxa: G. luteum is not genetically distant enough from Lamium to be considered a separate genus, and integration of Galeobdolon and Lamium is legitimate.
Go to article

Abstract

Holoparasitic genera within the family Orobanchaceae are characterized by greatly reduced vegetative organs; therefore, molecular analysis has proved to be a useful tool in solving taxonomic problems in this family. For this purpose, we studied all species of the genera Orobanche and Phelipanche occurring in Central Europe, specifically in Poland, the Czech Republic, Slovakia, and Austria, supplemented by samples mainly from Spain, France, Germany, and Ukraine. They were investigated using nuclear sequences (ITS region) and a plastid trnLtrnF region. The aim of this study was to examine phylogenetic relationships within Orobanche and Phelipanche from Central Europe; we focused on problematic species and aggregates, recent taxonomic changes in these (rank and secondary ranks), and host ranges. The most interesting results concern the exlusion of O. mayeri from O. alsatica aggr. Additionally, following the rules of traditional taxonomy, the correct names and types of some secondary ranks are given and, as a result of this, a new combination below the Phelipanche genus is made (P. sect. Trionychon). The host ranges of the investigated species in Central Europe include 102 species from 12 families, most often from Asteraceae. For this purpose, ca. 400 localities were examined in the field. Moreover, data acquired from the literature and European and Asian herbaria were used.
Go to article

This page uses 'cookies'. Learn more